Analysis Plans

Overview of HMT’s metabolome analysis services

For hydrophilic and highly polar metabolites
Basic scan Global profiling of hydrophilic and ionic metabolites Details
Advansed scan Non-targeted analysis of hydrophilic and ionic metabolites, including unknown peaks Details
ω Scan Highly sensitive and comprehensive analysis of hydrophilic and ionic metabolites Details
C-SCOPE Highly sensitive quantitative analysis of central energy metabolism Details
F-SCOPE Analysis of stable isotope-labeled metabolites Details

 

For hydrophilic and highly polar metabolites, as well as lipophilic metabolites with low polarity
Dual Scan The most comprehensive plan for the analysis of lipophilic metabolites, in addition to hydrophilic and ionic metabolites Details

 

For lipophilic metabolites with low polarity
Mediator Scan Highly sensitive analysis of lipid mediators Details

 

Choosing a suitable plan

Overview of HMT’s metabolome analysis services

We recommend choosing a plan based on the metabolites and metabolic pathways of your interest.

  • For screening a wide range of metabolites in addition to energy metabolism: Basic Scan
  • For comprehensive analysis, including unknown metabolites: Advanced Scan
  • For the analysis of small amounts of sample, or when high sensitivity analysis is required: ω Scan
  • For capturing energy metabolism: C-SCOPE
  • For label analysis using stable isotopes: F-SCOPE
  • For comprehensive analysis of lipophilic metabolites, in addition to hydrophilic and ionic metabolites: Dual Scan
  • For those who are focusing on lipid mediators: Mediator Scan

If you have trouble choosing a suitable plan, please contact your local distributor or you may reach out to us directly using our inquiry form below:
Contact Form 

 


Optional Analysis

3 types of options are available:

Optional Analysis* Click on the table to enlarge

Type 1 - Extension of analysis coverage

Option 1:Analysis of lipophilic metabolites (LC-TOFMS)
Analysis of lipophilic metabolites (LC-TOFMS) Approximately 300 metabolites, including fatty acids, acylcarnitines, bile acids, steroids, and polyphenols are analyzed using LC-TOFMS platform.
LC-TOFMS Analysis can be ordered separately.
Applicable analysis plans Advansed scanC-SCOPE
Option 2:Peptide Search
Peptide Search Names of candidate peptides will be reported when peaks with m/z and MT matching approximately with HMT’s Oligopeptide Library* are detected in the analysis results.
*Library contains m/z and MT of selected dipeptides, and m/z of tri- and tetrapeptides based on 20 proteinogenic amino acids.
Applicable analysis plans Basic scanDual Scan
Peptide Search is included in Advanced Scan
Option 3:Dipeptide Scan
Dipeptide Scan Names of candidate peptides will be reported when a peak with m/z and MT matching approximately with HMT’s Dipeptide Library** is detected in the analysis results.
**Library contains m/z and MT of selected dipeptides based on 20 proteinogenic amino acids
Applicable analysis plans ω Scan

 

Type 2 - Quantitative

Option 4:Quantification of 110 selected metabolites (Q-OPTION 110)
Quantification of 110 selected metabolites Concentrations of 110 selected metabolites related to glycolysis/ gluconeogenesis, TCA cycle, pentose phosphate pathway, lipid metabolism, amino acid metabolism and nucleic acid metabolism, are calculated with single-point calibration.
*If the concentration in the sample is below the detection limit, it will not be reported.
Applicable analysis plans Basic scanAdvansed scanω ScanDual Scan
Option 5:Quantification of 353 selected metabolites (Q-OPTION 353)
Quantification of 353 selected metabolites Concentrations of 353 selected metabolites related to glycolysis/ gluconeogenesis, TCA cycle, pentose phosphate pathway, lipid metabolism, amino acid metabolism and nucleic acid metabolism, are calculated with single-point calibration.
*If the concentration in the sample is below the detection limit, it will not be reported.
Applicable analysis plans Basic scanAdvansed scanω ScanDual Scan

 

Type 3 – Additional analysis

Option 6:Additional analysis report
Additional analysis report The following will be performed for one pattern specified by the customer:
・Comparison between groups
・Statistical analysis
・Pathway maps
* Due to the nature of the analysis methods, PCA and HCA can be performed only for tests with three or more samples.
** For two or more patterns, please place an order for the respective patterns.
Applicable analysis plans Basic scanAdvansed scanω ScanC-SCOPEF-SCOPEDual ScanMediator Scan

 


Service Flow

Service Flow


How to place an order

Contact your local distributor or HMT directly

When making an inquiry, please provide us with the following information:

  • Type (cultured cells, tissues, blood, etc.), species (human, animal), conditions (e.g., disease, drug treatment, etc.), and number of samples
  • Metabolites of particular interest (if any)
  • Experience in metabolome analysis (if any)

We look forward to hearing from you!
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